Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905568.1_cds_XP_016455821.1_49714
CDS Infomation

[gene=LOC107779839] [db_xref=GeneID:107779839] [protein=type IV inositol polyphosphate 5-phosphatase 9-like] [protein_id=XP_016455821.1] [location=complement(join(19367..19622,20392..20543,20658..20766,21386..21570,22248..22596,22711..22818,23058..23233,23643..23663))] [gbkey=CDS]
Sequence

ATGCCAAGAAAGAAAGGAGAAGTTATGTGGCCAAGATTGGTAGCTAGTAAGGTCCTAAAG
AGATTGGGGAGCACCAACTTTGTGGCAGATTTTCCAAGTGATTCAGAATATTTATTAGAG
ATTCCCCGTTTTGATAAAAAATCCTTCAGTTCTAATGACATTATTTTCAACGATCACGAG
GACACTCAAAACTACAGGGTTTTTGTTAATACATGGAACGTTGGAGGAGTTGTACCAAGT
GACGATTTCAATGTGGATGATCTGCTTGCCACATGCCACACTTCATGTGACATCTATGTT
TTTGGGTTTCAAGAAGTAGTGCCACTAAGAGCAGCAAATGTTCTTGGATCAGAGAGTGGA
AGGATTTCATCAAAGTGGAATTCCTTAATAAGAGAAGCTCTGAACAAGAAAAAAGCCAAA
GAAGTTGGAAATGAAGACACTAAACAGAAAGGAAAGGAAAATACGAATATTCAATTGGTA
CAAAAGAATGGAAATGAAAATGGCCAATTTTCAAAAGAATTCAGTTGTATTATCAGTAAG
CAAATGGTGGGAATATTGATATCAGTATGGGTTCGAAATGATTTTCGTTCCTTCATTCGA
AACCCTAGTGTCTCTTGTGTTGGCTGTGGCATCATGGGTTGCTTAGGCAACAAGGGTGCA
GTATCAGTTAGATTTCAGTTGCATGAAACAAGCTTATGTTTTGTGTGCAGTCATCTAGCT
TCTGGGGGTAGAGAAGGAGATGAGAAGATTCGCAATGCAAATGTTGCTGAAATATTTTCA
AGAACAACCTTTCCAAAAGGCTCCTCCCTTGAATTACCAAGAAAGATTCTAGATCATGAC
CGAGTGATATTGCTTGGAGATTTGAACTACAGGATTTCTTTACCAGAATCAACTACAAGA
TTATTAGTGGAACAAGGAGAATGGAATGCACTCTTGGAAAATGATCAGTTGCAGATGGAG
CTAACGGATGGACAAGTATTTGAAGGTTGGCAAGAAGGAATGATCAAATTTGCCCCTACT
TACAAATATTATCCAAATTCGAGTGATTACTATGGTAGACCAGAGGTGAAAAGAGGCGAA
AAGAAACGTGCTCCTGCATGGTGTGATAGGATAATTTGGTATGGAGAAGGGTTAAAGCAA
CAATTGTATGCACGAGGTGAATCAAGATTATCGGATCACAGACCAGTGAAGGCAATTTTC
AGCACACAAGTAAGAGTATCAAGAAAGTTGAAGAGATTACAAAGTTTCTTTTTATCAGAA
AGATTTGAACAGATCACAAGCCACTTAGAGATGCACTCACCAAAAGATGACTTTCCATGT
AATGCCAGATTAAGTCTGCAACTTAAAGATATATAG

Peptide Sequence

PEP ID

XP_016455821.1
PEP Infomation

PREDICTED: type IV inositol polyphosphate 5-phosphatase 9-like [Nicotiana tabacum]
Sequence

MPRKKGEVMWPRLVASKVLKRLGSTNFVADFPSDSEYLLEIPRFDKKSFSSNDIIFNDHE
DTQNYRVFVNTWNVGGVVPSDDFNVDDLLATCHTSCDIYVFGFQEVVPLRAANVLGSESG
RISSKWNSLIREALNKKKAKEVGNEDTKQKGKENTNIQLVQKNGNENGQFSKEFSCIISK
QMVGILISVWVRNDFRSFIRNPSVSCVGCGIMGCLGNKGAVSVRFQLHETSLCFVCSHLA
SGGREGDEKIRNANVAEIFSRTTFPKGSSLELPRKILDHDRVILLGDLNYRISLPESTTR
LLVEQGEWNALLENDQLQMELTDGQVFEGWQEGMIKFAPTYKYYPNSSDYYGRPEVKRGE
KKRAPAWCDRIIWYGEGLKQQLYARGESRLSDHRPVKAIFSTQVRVSRKLKRLQSFFLSE
RFEQITSHLEMHSPKDDFPCNARLSLQLKDI

Transcript Sequence

Gene sequence data has not been registered.